white Lupin proteoid root EST signal intensities, array III, category 3: AMINO ACID AND PROTEIN METABOLISM

L#	GenBank accession #	bp	E-value	annotation	spot A	spot B	average	spot A	spot B	average	spot A	spot B	average	spot A	spot B	average	spot A	spot B	average	spot A	spot B	average	spot A	spot B	average
Array III category 3: AMINO ACID AND PROTEIN METABOLISM					-P proteoid root 10 DAE			-P proteoid root 12 DAE			-P proteoid root 14 DAE			+P normal root 14 DAE			-P normal root 14 DAE			+P leaf 14 DAE			-P leaf 14 DAE
414	CA410151	491	2.00E-37	26S protease regulatory subunit 7 (26S proteasome ATPase)	107.3	112.8	110.1	164	174	169	105	156	130	129.3	145	137	95.2	100	97.7	48.3	57.8	53.1	29.5	35.6	32.5
1348	CA409791	604	8.00E-54	"26S protease regulatory subunit 8, "	278.9	344.6	311.8	320	282	301	188	159	174	217	130	173	71.7	103	87.1	86.7	105	96	125	120	123
740	CA410474	477	1.00E-34	"26S protease subunit 4, putative"	1135	1009	1072	966	831	899	416	653	534	383.9	412	398	615	556	585	335	271	303	317	454	385
918	CA410665	527	2.00E-49	proteinase homolog	206.3	124.5	165.4	223	142	183	207	168	188	231	174	202	157	131	144	74.6	118	96.4	48.8	50.8	49.8
1148	CA409610	567	3.00E-40	"26S proteasome subunit athMOV34, putative"	227.1	209.3	218.2	188	207	197	172	174	173	112.9	208	160	184	158	171	49.8	38.2	44	116	56.5	86.4
828	CA410562	444	1.00E-16	3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34)	281.1	242.7	261.9	287	157	222	155	173	164	207.6	286	247	208	217	212	42.5	57.8	50.2	41.2	79.2	60.2
809	CA410543	261	6.00E-14	3-hydroxyisobutyryl-coenzyme A hydrolase	226.9	202.8	214.8	226	246	236	240	142	191	258.4	241	250	237	280	259	71.4	67.1	69.3	67.4	78.9	73.1
1221	CA409681	528	3.00E-45	3-hydroxyisobutyryl-coenzyme A hydrolase homolog T9E8.100	135.4	104.8	120.1	188	221	204	142	166	154	169.7	142	156	122	146	134	43.6	34.5	39.1	49.1	69.1	59.1
1317	CA409766	201	1.00E-14	3-hydroxyisobutyryl-coenzyme A hydrolase homolog T9E8.100	276.9	259.9	268.4	285	244	264	246	160	203	281.6	207	244	227	246	236	38.8	60.3	49.6	115	85.4	100
279	CA410017	439	7.00E-25	40S ribosomal protein S2	423	351.4	387.2	323	322	323	283	291	287	328.9	338	333	434	184	309	97.2	79.6	88.4	79.9	126	103
1237	CA409693	538	2.00E-37	40S ribosomal protein S2	293.6	346.8	320.2	347	275	311	354	353	354	367.8	343	355	360	396	378	125	70.4	97.5	64	69.6	66.8
1164	CA409626	550	1.00E-39	40S ribosomal protein S3A	241.9	398	320	545	517	531	189	175	182	448.9	456	452	134	181	158	94.9	81.5	88.2	135	95.3	115
421	CA410158	436	6.00E-43	40S ribosomal protein S4	1319	1536	1427	1019	1237	1128	598	962	780	505.7	794	650	933	1139	1036	590	527	559	549	502	526
60	CA410338	415	9.00E-34	40S ribosomal protein S6	450.9	507.1	479	292	436	364	185	190	187	453.9	385	419	350	272	311	103	56.2	79.4	89	57.6	73.3
555	CA410288	461	1.00E-34	40S ribosomal protein S8	586.9	413.8	500.3	506	478	492	322	380	351	487.8	501	495	313	391	352	90.5	109	99.5	114	129	121
1223	CA409683	571	6.00E-35	40S ribosomal protein S8	373.7	316.3	345	300	321	311	323	221	272	297.9	374	336	386	392	389	90.8	81	85.9	124	66.2	94.9
549	CA410282	441	3.00E-31	ribosomal protein S8	479.9	428.5	454.2	288	357	323	319	238	279	333.4	405	369	277	311	294	118	115	116	83	80.3	81.7
1309	CA409758	536	3.00E-16	60S acidic ribosomal protein P2	235.1	239.1	237.1	206	182	194	196	206	201	280.1	201	241	283	209	246	97.5	42.4	69.9	57.9	83.9	70.9
794	CA410528	496	3.00E-14	60S acidic ribosomal protein PI	1805	1879	1842	41.4	179	110	1833	1695	1764	1717	1977	1847	917	1289	1103	1324	1430	1377	1226	1250	1238
922	CA410670	531	5.00E-43	60S ribosomal protein L1	240.9	171.1	206	199	178	188	171	119	145	151.3	201	176	196	210	203	57.7	68.4	63	66.6	78.3	72.4
326	CA410066	445	3.00E-38	60S ribosomal protein L11	400.3	398.5	399.4	205	273	239	157	215	186	328	334	331	220	179	199	79.2	90.5	84.9	64.8	63.6	64.2
1069	CA409531	443	9.00E-43	60S ribosomal protein L3	270.2	405.8	338	530	529	530	313	354	333	234	412	323	617	380	498	124	139	132	140	137	139
355	CA410097	498	5.00E-40	arginine decarboxylase (EC 4.1.1.19)	111.9	127.9	119.9	166	201	184	144	173	158	201	225	213	98.1	150	124	150	48	99.2	106	130	118
725	CA410458	469	3.00E-49	arginine decarboxylase (EC 4.1.1.19)	125.8	144.6	135.2	129	111	120	134	177	156	79.06	203	141	77	67	72	50.7	75.9	63.3	24.4	35.4	29.9
848	CA410583	482	4.00E-47	arginine decarboxylase (EC 4.1.1.19)	173.9	274.8	224.3	179	206	193	162	181	172	220.3	208	214	121	125	123	72.2	99.3	85.7	98.2	98.1	98.1
453	CA410186	433	3.00E-10	argininosuccinate synthase (EC 6.3.4.5)	123	216.3	169.6	133	199	166	201	161	181	95.54	144	120	120	108	114	49.6	91.9	70.7	45.4	70.2	57.8
1071	CA409533	455	8.00E-15	aspartate aminotransferase (EC 2.6.1.1)	111	102	106.5	203	143	173	121	185	153	105	70.6	87.8	159	81.5	120	32.7	40.3	36.5	52	67.1	59.6
663	CA410393	458	3.00E-12	aspartate aminotransferase-homolog	493	493	493	589	725	657	384	461	422	329	382	356	368	391	380	137	160	149	216	208	212
655	CA410384	452	1.00E-11	aspartate aminotransferase-homolog	611	586.4	598.7	636	651	643	223	208	215	253	362	308	485	492	488	265	196	230	356	371	363
8	CA410632	230	6.00E-06	ATP dependent CLP protease proteolytic subunit	98.9	75.09	87	113	116	115	128	116	122	89.6	111	100	52	129	90.5	43.8	42.2	43	61.4	51.5	56.5
200	CA409935	474	4.00E-27	ATP dependent CLP protease proteolytic subunit	356	621.1	488.5	805	601	703	443	375	409	338.9	282	310	253	332	293	223	195	209	418	371	394
116	CA409630	440	9.00E-33	cathepsin B-like cysteine proteinase	103.8	159.6	131.7	247	235	241	264	261	262	244.9	188	216	217	198	208	64.2	80.8	72.5	114	131	123
1185	CA409644	552	3.00E-22	"cucumisin-like serin protease / subtilisin-like proteinase (EC 3.4.21.-), "	131.5	117.7	124.6	197	170	184	152	208	180	262.4	255	259	209	180	195	101	80.5	90.8	120	161	140
1083	CA409544	503	1.00E-37	cystathionine-gamma-synthase precursor (EC 4.2.99.9)	239.5	364.1	301.8	410	340	375	229	269	249	372.1	324	348	105	231	168	406	248	327	307	549	428
1063	CA409525	543	3.00E-34	cystein proteinase	245.8	380	312.9	504	487	495	276	350	313	393.9	386	390	183	278	231	118	116	117	172	210	191
689	CA410420	471	2.00E-48	cysteine protease	511.5	581.3	546.4	760	611	686	865	896	881	281.5	183	232	234	228	231	222	204	213	234	247	240
81	CA410553	407	9.00E-40	cysteine proteinase	320.9	329.6	325.2	622	763	693	961	654	807	880.2	894	887	456	345	401	183	163	173	151	102	127
915	CA410662	485	1.00E-42	elongation factor 1-alpha (EF-1-alpha)	333.6	601.4	467.5	435	384	410	319	285	302	662.9	646	654	570	564	567	103	181	142	167	183	175
1111	CA409575	547	7.00E-41	elongation factor 1-alpha (EF-1-alpha)	1758	1820	1789	556	974	765	1716	1061	1388	1463	1635	1549	2041	2228	2135	691	679	685	1188	961	1074
1207	CA409666	541	9.00E-44	"elongation factor 1-alpha (EF-1-alpha), Vicia faba etc."	709.9	623.3	666.6	676	490	583	591	513	552	577.5	754	666	626	558	592	168	150	159	198	348	273
1079	CA409539	541	5.00E-47	"elongation factor 1-alpha, translation elongation factor eEF-1"	1435	1417	1426	970	763	866	583	769	676	676	914	795	727	1028	878	216	418	317	375	335	355
1375	CA409818	534	5.00E-47	"elongation factor 1-alpha, translation elongation factor eEF-1"	1544	1576	1560	959	961	960	946	906	926	953.8	1031	992	926	889	907	203	424	313	470	501	486
322	CA410062	469	5.00E-48	translocation elongation factor eEF-1 alpha chain (EF-1-ALPHA)	974.9	874.5	924.7	950	615	782	234	421	328	674.5	1008	841	746	494	620	184	198	191	188	243	216
286	CA410025	469	4.00E-32	elongation factor 1B gamma	63.47	92.86	78.17	94.6	88.9	91.8	123	122	122	78.82	108	93.2	79.9	86.8	83.3	57.1	26.1	41.6	36.7	44.2	40.4
1218	CA409677	93	8.00E-19	elongation factor 1-beta (EF-1-beta)	378.2	592	485.1	472	428	450	284	237	260	351.7	420	386	485	414	449	131	117	124	170	178	174
191	CA409927	468	3.00E-33	elongation factor 2 (EF-2)	137.8	222	179.9	207	266	236	252	267	259	233.7	236	235	178	215	196	47	84.5	65.7	32.9	97	65
1387	CA409831	567	6.00E-44	glutamine synthetase (EC 6.3.1.2)	337.8	273.5	305.7	389	350	370	181	171	176	427.6	389	408	293	243	268	85.8	83.8	84.8	124	138	131
764	CA410499	428	1.00E-39	glutamine synthetase (EC 6.3.1.2)	358.8	273.9	316.4	513	499	506	363	424	393	422.3	595	509	378	379	379	30.9	70	50.4	52.2	63.4	57.8
807	CA410541	497	4.00E-56	glutamine synthetase isozyme (cytosolic/ root/ nodule) (EC 6.3.1.2)	356.6	307.1	331.9	245	357	301	274	459	366	491	618	554	311	308	309	42.4	43	42.7	52.4	59.5	56
1366	CA409808	563	1.00E-46	glycine hydroxymethyltransferase (EC 2.1.2.1)	1329	976.7	1153	856	657	757	754	1003	878	600	665	633	915	864	889	430	440	435	606	604	605
1320	CA409770	566	3.00E-42	"homogenotisate 1,2-dioxygenase (EC 1.13.11.5)"	52.08	146.3	99.18	195	170	182	158	251	205	176	155	166	133	126	130	47.4	33.4	40.4	66.8	57.9	62.3
979	CA410710	557	2.00E-33	hyp. protein F6F22/-10 prob. 60S ribos. protein	220.4	330.6	275.5	166	155	161	291	144	218	222.7	270	247	246	86.2	166	134	113	124	119	174	147
501	CA410237	501	3.00E-36	hyp. protein T24I21.7 /1E-32 EF-1 alpha-like protein	474.9	468.6	471.7	549	440	494	572	568	570	517.8	571	545	433	348	391	187	387	287	462	295	379
1370	CA409813	592	5.00E-19	"importin alpha subunit (karyopherin alpha subunit), tomato etc."	141.1	205.9	173.5	140	185	162	214	218	216	181.6	184	183	171	122	146	50.1	71.7	60.9	41.8	31.4	36.6
850	CA410586	523	1.00E-29	ketol-acid reductoisomerase precursor (EC 1.1.1.86)	171	160.2	165.6	201	188	195	134	159	147	175.1	202	188	157	85.9	122	53.9	92	72.9	119	144	131
1077	CA409537	552	1.00E-14	lysyl-tRNA synthetase (EC 6.1.1.6)	150.4	142.3	146.4	111	114	112	163	168	166	119.9	127	124	84.1	99	91.6	52.8	31.6	42.2	30.7	56	43.4
838	CA410573	517	3.00E-25	microsomal signal peptidase subunit 18kD	175.5	156.4	166	214	202	208	122	216	169	229.2	191	210	133	236	185	68.4	52.4	60.4	121	93.2	107
426	CA410163	499	5.00E-29	mitochondrial LON protease homolog/ATP dependent protease LA2	118.6	136.6	127.6	102	139	120	176	169	172	157.3	202	180	171	146	158	31.6	53	42.3	38.2	33.9	36
246	CA409982	364	4.00E-18	mitochondrial processing peptidase	344.1	195.3	269.7	271	372	322	296	298	297	702	773	738	152	165	159	58.9	45	52	64.3	60.2	62.3
1257	CA409708	136		"blastn: 6E-9 cathepsin B-like, putative"	357	363.2	360.1	354	344	349	188	316	252	226	246	236	329	223	276	97.1	82.8	90	93.3	100	96.7
588	CA410318	483	2.00E-45	peptidyl-prolyl cis-trans isomerase	826.9	759.6	793.3	660	615	637	342	264	303	601.6	611	606	496	476	486	225	139	182	224	273	248
611	CA410340	127	6.00E-09	peptidyl-prolyl cis-trans isomerase	717.9	539.3	628.6	385	338	361	375	410	392	570.2	533	551	279	383	331	122	71	96.7	225	222	224
650	CA410379	419	6.00E-33	peptidylprolyl isomerase (5.2.1.8)	87.73	106.1	96.92	244	255	249	208	158	183	227.1	202	215	138	159	148	66	60.9	63.4	84.8	65.8	75.3
658	CA410387	534	5.00E-39	peptidylprolyl isomerase (5.2.1.8)	56.57	67.26	61.92	72.6	118	95.5	146	133	139	103.2	113	108	103	91.1	97	39.5	8.2	23.9	17.2	51.2	34.2
385	CA410120	391	2.00E-25	peptidylprolyl isomerase (EC 5.2.1.8)	1504	1570	1537	1037	874	955	696	760	728	997.2	910	954	1004	1367	1185	909	931	920	1006	1024	1015
386	CA410121	262	5.00E-19	peptidylprolyl isomerase (EC 5.2.1.8)	150.9	182.6	166.7	103	124	113	240	210	225	164.6	160	162	121	193	157	74.5	88.5	81.5	104	61.5	82.9
1114	CA409578	529	4.00E-17	poly (A) binding protein II	101.3	97.44	99.38	136	103	120	114	111	112	82.18	103	92.4	73.3	74.7	74	17.4	34.9	26.1	19.1	51.6	35.3
619	CA410347	459	2.00E-34	polyA binding protein	242.7	209.5	226.1	178	160	169	219	281	250	267.4	273	270	206	163	185	77.3	87	82.1	152	151	151
880	CA410612	418	1.00E-30	"polyadenylate binding protein, poly-A binding protein"	383.9	328.6	356.2	440	288	364	277	406	341	372.3	283	328	290	153	221	200	247	224	111	265	188
803	CA410537	482	2.00E-24	"polyadenylate binding protein, poly-A binding protein"	437.3	592.4	514.8	503	406	455	452	335	393	550.3	421	486	260	456	358	181	102	141	313	274	294
359	CA410101	461	2.00E-45	polyubiquitin	494.7	605.9	550.3	585	581	583	669	733	701	817.3	871	844	559	553	556	115	248	182	271	255	263
515	CA410252	486	2.00E-49	polyubiquitin	491	573.4	532.2	428	394	411	370	326	348	616.5	542	579	258	314	286	85.5	60.1	72.8	108	67.3	87.4
1345	CA409788	519	4.00E-44	"ubiqitin, Arabidopsis etc. / 5E-44 polyubiquitin Acetabularia etc. "	1535	1594	1565	1279	1023	1151	1315	1333	1324	1332	1446	1389	1145	1225	1185	575	550	562	662	623	642
787	CA410522	433	7.00E-44	polyubiquitin	1221	906.4	1064	1103	998	1051	794	760	777	1588	1455	1521	953	389	671	540	370	455	696	650	673
1359	CA409802	552	3.00E-55	"polyubiquitin, parsley etc."	1387	1498	1443	1175	1219	1197	767	1135	951	1038	1185	1111	763	682	722	413	488	450	726	686	706
587	CA410317	438	2.00E-43	ubiquitin	877.7	809.4	843.6	714	709	711	610	674	642	843.7	855	849	501	577	539	94.8	239	167	206	153	180
820	CA410554	402	1.00E-34	polyubiquitin	356.4	306.9	331.6	409	437	423	236	266	251	413.6	288	351	263	295	279	129	99.3	114	92.4	139	116
518	CA410255	382	1.00E-29	ubiquitin precursor	250.5	195.1	222.8	199	236	217	204	269	237	315	298	306	119	122	121	74.6	78.6	76.6	31.1	24	27.6
833	CA410568	494	4.00E-48	polyubiquitin	341.9	414.3	378.1	688	570	629	401	474	438	519	496	508	459	432	446	160	193	176	108	104	106
1330	CA409780	610	4.00E-37	proline iminopeptidase	150.4	144.1	147.2	169	224	196	158	207	182	176.2	177	177	161	134	147	99.1	61.6	80.4	73.7	70.3	72
1217	CA840674	426	5.00E-34	"proteasome 26S, probable, reg. Subunit S12 "	1185	1151	1168	1172	1157	1164	652	684	668	491.1	494	492	1081	940	1010	442	474	458	484	367	426
852	CA410588	528	1.00E-06	protein disulfide-isomerase (EC 5.3.4.1)	135.4	135.3	135.4	155	160	158	152	183	168	125.2	109	117	103	138	121	85.4	52.8	69.1	46.9	51.6	49.2
430	CA410168	484	1.00E-40	protein phosphatase 2C-like protein	137.6	131.2	134.4	116	93.3	105	180	179	179	190	161	176	141	91.4	116	31.5	61.2	46.3	53	79.6	66.3
4	CA410235	491	2.00E-40	protein phosphatase type 2C	90.54	120.3	105.4	92.2	92.8	92.5	141	132	137	103.1	68.4	85.8	84.1	63.9	74	35.3	49.3	42.3	50.5	36.8	43.7
945	CA410678	244	2.00E-10	ribosomal protein L10	1201	894.5	1048	1079	762	920	286	395	341	809.9	741	776	765	533	649	263	203	233	260	386	323
486	CA410219	477	6.00E-45	ribosomal protein L12	325.6	362.6	344.1	240	189	215	357	283	320	365.4	442	404	474	470	472	71.5	104	87.6	80.7	48	64.3
907	CA410639	563	1.00E-41	ribosomal protein L19	619.7	619.9	619.8	436	412	424	273	115	194	433	458	445	476	391	434	119	85.5	102	134	160	147
252	CA409989	448	1.00E-42	ribosomal protein L24	968.3	922.1	945.2	703	656	680	265	212	238	685.7	592	639	684	430	557	112	69.6	90.7	101	98.8	100
373	CA410115	473	1.00E-34	ribosomal protein L4	306.7	362.6	334.6	277	295	286	253	223	238	300.7	261	281	182	166	174	85.7	95.8	90.8	59.5	99	79.2
431	CA410169	497	2.00E-28	ribosomal protein S24	218.2	421.8	320	211	171	191	189	219	204	312.1	336	324	161	213	187	55.4	64.7	60	82.6	72.9	77.7
432	CA410170	463	2.00E-30	ribosomal protein S5	514.5	437	475.8	249	315	282	277	297	287	401.7	437	419	206	209	208	104	96.5	100	110	58.7	84.5
454	CA410187	404	2.00E-38	ribosome protein L13 (BBC1 protein homolog)	513.2	327.1	420.1	350	345	348	243	290	267	469.9	474	472	410	471	441	145	121	133	102	124	113
461	CA410194	507	1.00E-37	ribosome protein L5	559.9	552	556	510	523	516	286	417	351	499.7	399	449	337	359	348	112	130	121	108	135	122
1096	CA409558	583	1.00E-23	similar to protein disulfide isomerase	98.57	129.7	114.2	159	123	141	157	123	140	112.9	99.6	106	127	125	126	34.8	12.7	23.8	58.6	150	104
272	CA410011	442	4.00E-18	subtilisin-like proteinase homolog F7L13.110	171.8	321.2	246.5	384	418	401	274	248	261	386.4	421	404	323	342	332	57.4	45.9	51.7	75	42.9	59
1052	CA409514	591	2.00E-46	translation initiation factor	133.1	141.1	137.1	160	200	180	213	169	191	134.9	119	127	175	159	167	46.7	92.6	69.6	41.5	81	61.3
276	CA410014	466	4.00E-28	translation initiation factor	590.5	530.7	560.6	804	949	877	597	801	699	717.4	609	663	485	498	491	129	80.6	105	155	154	154
987	CA410718	556	2.00E-43	"translation initiation factor 5A, (EIF-5A)"	474.1	401.9	438	370	460	415	252	289	271	316.2	494	405	340	238	289	143	105	124	160	91.4	126
295	CA410035	481	6.00E-42	translation initiation factor eIF3-like	163.5	137.3	150.4	102	116	109	134	128	131	142.1	155	149	86.1	113	99.5	16	46.2	31.1	38.4	74.2	56.3
888	CA410619	616	6.00E-41	"translation initiation factor, (EIF-4A)"	162.6	108.1	135.4	187	204	196	250	224	237	179.8	156	168	136	173	154	97.2	111	104	83.6	86.3	85
817	CA410550	498	1.00E-39	"translation initiation factor, eukaryotic (EIF-4A)"	212.5	209.8	211.2	244	250	247	236	226	231	165.5	273	219	277	196	237	88.5	72	80.2	82.3	96.6	89.4
1105	CA409568	554	3.00E-32	translocation elongation factor EF-Tu	134.4	119.2	126.8	160	137	148	132	160	146	164.5	181	173	126	114	120	478	428	453	596	617	607
726	CA410459	448	5.00E-39	ubiquitin extension protein	1619	1531	1575	1065	1085	1075	1128	1087	1107	994.7	973	984	799	640	719	409	428	419	493	519	506
553	CA410286	479	2.00E-42	ubiquitin/ribosomal protein CEP52	504.3	311.1	407.7	548	590	569	380	284	332	414.3	299	356	369	367	368	132	95.4	114	141	49.6	95.5
1	CA409934	446	4.00E-43	ubiquitin/ribosome protein	314.7	257.5	286.1	345	371	358	228	252	240	234.7	249	242	274	203	238	66.7	58.9	62.8	107	45.5	76.2
522	CA410260	502	2.00E-56	ubiquitin conjugating enzyme E2-17 KD (EC 6.3.2.19)	600	302.1	451.1	486	348	417	527	482	505	496.1	512	504	739	743	741	133	74	103	64.3	104	84
479	CA410212	500	9.00E-34	ubiquitin-conjugating enzyme	163	134.9	148.9	173	195	184	247	255	251	165.5	188	177	159	158	159	34.7	41.9	38.3	33.2	39.2	36.2
712	CA410444	397	3.00E-06	ubiquitin-conjugating enzyme E2	381.6	400.4	391	189	186	188	210	234	222	385.9	451	419	190	177	184	79.8	89.8	84.8	73.3	14.1	43.7
280	CA410019	457	3.00E-37	ubiquitin-conjugating enzyme UBC7	186.9	183.7	185.3	197	242	220	233	209	221	245.1	293	269	165	166	165	39.6	47.9	43.8	51.7	87.1	69.4

Array III

category 3: AMINO ACID AND PROTEIN METABOLISM

-P proteoid root 10 DAE

-P proteoid root 12 DAE

-P proteoid root 14 DAE

+P normal root 14 DAE

-P normal root 14 DAE

+P leaf 14 DAE

-P leaf 14 DAE